Publications

( Google Scholar page )

Preprints

EF Lock and G Li. Supervised multiway factorization. arXiv:1604.08654, 2016.
( arXiv pdf) (Matlab code)

MJ O'Connell and EF Lock. Linked Matrix Factorization. arXiv:1710.02931, 2017.
( arXiv pdf) (R code) (*a version of this manuscript won an ENAR 2018 Student Paper Award*)

Journal Articles

EF Lock, N Kohli and M Bose. Detecting Multiple Random Changepoints in Bayesian Piecewise Growth Mixture Models. Psychometrika, to appear, 2017. PMID:29150814
( arXiv preprint) (R package)

EF Lock. Tensor-on-tensor regression. Journal of Computational and Graphical Statistics, to appear, 2017.
( arXiv preprint) (R package)

R Rao, K Ennis, G Lubach, EF Lock, M Georgieff, and C Coe. Metabolomic Analysis of CSF Indicates Brain Metabolic Impairment Precedes Hematological Indices of Anemia in the Iron-Deficient Infant Monkey. Nutritional Neuroscience, 21 (1):40-48, 2018.
( PubMed link)

A Kaplan and EF Lock. Prediction with Dimension Reduction of Multiple Molecular Data Sources for Patient Survival. Cancer Informatics, 16: 1-11, 2017. PMID:28747816
(link) (pdf) (video abstract)

T Lyu, EF Lock and LE Eberly. Discriminating sample groups with multi-way data. Biostatistics, 18 (3): 434-450, 2017. PMID: 28115314
( pdf) ( R package)

EF Lock and DB Dunson. Bayesian Genome- and Epigenome-wide Association Studies with Gene Level Dependence. Biometrics, 73 (3): 1018-1028, 2017. PMID:28083869
( arXiv pdf) ( R package)

MJ O'Connell and EF Lock. R.JIVE for exploration of multi-source molecular data. Bioinformatics, 32(18):2877-2879, 2016.
(PubMed link) (pdf) (R package)

EF Lock and DB Dunson. Shared kernel Bayesian screening. Biometrika, 102 (4):829-842, 2015. PMID: 27046939
( link) ( R code) ( arXiv pdf)

J Kuligowski, D Perez-Guaita, A Sanchez-Illana, Z Leon-Gonzalez, M de la Auardia, M Vento, EF Lock, G Quintas. Analysis of multi-source metabolomic data using joint and individual variation explained (JIVE). Analyst, 2015, 140, 4521-4529.
( link)

EF Lock, K Soldano, ME Garrett, H Cope, CA Markunas, H Fuchs, G Grant, DB Dunson, SG Gregory, AE Ashley-Koch. Joint eQTL Assessment of Whole Blood and Dura Mater Tissue from Individuals with Chiari Type I Malformation. BMC Genomics, 16:11, 2015.
(link)

CA Markunas, EF Lock, K Soldano, H Cope, CC Ding, DS Enterline, G Grant, H Fuchs, AE Ashley-Koch, SG Gregory. Identification of Chiari Type I Malformation subtypes using whole genome expression profiles and cranial base morphometrics. BMC Medical Genomics, 7:39, 2014.
(link)

J Zhang, D Jima, Q Liu, A Moffitt, M Czader, Y Fedoriw, K Richards, Z Sun, C Love, P Scotland, EF Lock, S Levy, DB Dunson, and S Dave. The genomic landscape of mantle cell lymphoma is related to the epigenetically determined chromatin state of normal B cells. Blood, 123 (19):2988-2996, 2014.
(link)

EF Lock and DB Dunson. Bayesian consensus clustering. Bioinformatics, 29 (20): 2610-2616, 2013.
(link) (arXiv) (software) (Bioinformatics pdf) (Bioinformatics supplement)

EF Lock, KA Hoadley, JS Marron, and AB Nobel. Joint and Individual Variation Explained (JIVE) for Integrated Analysis of Multiple Data Types. Annals of Applied Statistics, 7(1):523-542, 2013.
(link) (software) (arXiv)

DM Reif, M Sypa, EF Lock, FA Wright, A Wilson, T Cathey, RR Judson, and I Rusyn. ToxPi GUI: An interactive visualization tool for transparent integration of data from diverse sources of evidence. Bioinformatics, 29(3):402-403, 2013.
(link) (software)

EF Lock, N Abdo, O Kosyk, SH O'shae, R Huang, M Xia, YH Zhou, A Sedykh, A Tropsha, CP Austin, RR Tice, FA Wright and I Rusyn. Quantitative high-throughput screening for chemical toxicity in a population-based in vitro model.. Toxicological Sciences, 126(2): 578-588, 2012.
(link) (related blog post)

EF Lock, AB Nobel, and JS Marron. Comment: Population Value Decomposition, a Framework for the Analysis of Image Populations. Journal of the American Statistical Association, 106(495):798-802, 2011.
(link) (pdf)

BU Bradford, EF Lock, O Kosyk, S Kim, T Uehara, D Harbourt, M DeSimone, DW Threadgill, V Tryndyak, IP Pogribny, L Bleyle, DR Koop, and I Rusyn. Inter-strain differences in the liver effects of trichloroethylene in a multi-strain panel of inbred mice. Toxicological Sciences , 120(1):206-217, 2011.
(link) (data)

EF Lock, R Ziemiecki, D Dittmer, and JS Marron. Efficiency clustering for low-density microarrays and its application to QPCR. BMC Bioinformatics, 11:386, 2010.
(link) (software)

S Yeo, J Cisewski, EF Lock, JS Marron. Exploratory Analysis of Exercise Adherence Patterns With Sedentary Pregnant Women. Nursing Research, 59(4):280-287, 2010.
(link)

RM Frongillo, EF Lock, DM Brown. Symmetric fractal trees in three dimensions. Chaos, Solitons & Fractals, 32(2):284-295, 2007.
(link)

Books & Book Chapters

EF Lock and AB Nobel Exploratory methods to integrate multisource data. In GC Tseng, D Ghosh & XJ Zhou (Eds), Integrating Omics Data, pp. 242-268. Cambridge University Press, Cambridge, UK. 2015.
(Chapter preprint) (Book link)

RH Lock, PF Lock, KL Morgan, EF Lock, and DF Lock. Statistics: Unlocking the Power of Data. John Wiley & Sons, Hoboken, NJ, 2012.
(Website)